Tuesday, January 19, 2021

Bioenergetic Pathways Projects

 In preparation and review for their midterm exam, the class's Second Quarter Project involved preparing a presentation on some aspect of Cell Energetics, which composes Unit 3 of the AP Biology Syllabus. These are their completed projects, posted here as one of many tools they can use to review this difficult topic.

Second Quarter Project News... by Charles Ippolito 

Baclija, K. - Krebs Cycle

Becker, J. - Pigments and Photosystems 

Black, A. - Photosynthesis vs. Respiration



Brinster, M. - The Evolution of Metabolic Pathways

Cevasco, O. - Photosynthesis vs. Cellular Respiration  



D'Avico, H. - Homolactic vs. Alcoholic Fermentation 

Dessart, S. - Homolactic Fermentation vs Alcoholic Fermentation

Dibbini, M. - Electron Transport of Photosynthesis

Duffy, H - The Evolution of Metabolic Pathways

Faisca, A. - Photoautotrophs vs. Photoheterotrophs

Fleisig, E. - Chemoautotrophs vs. Photoautotrophs

Foley, E. - Aerobic Respiration vs. Anaerobic Respiration


 

Hulbert, C. - Pigments and Photosystems

Kim, N. - C3 Pathways 


Koenig, M. - Mitochondria (Cristae & ETC)

Krause, A. - Krebs Cycle

Krestinski, M. - Aerobic vs. Anaerobic Respiration 

Latham, S. - CAM Pathways

Marchetti, M. - Non-cyclic vs. Cyclic Photophosphorylation

McBride, K. - Glycolysis

McKhann, C. - Calvin Cycle

Min, H. - Chemiosmosis and ATP Synthase

Morgan, R .- Glycolysis

 


O'Hare, M. - Comparison of Photosynthesis & Respiration

O'Neil, C - CAM Metabolism of Photosynthesis

Outcalt, M. - Glycolysis

Pettee, M. - C3 Pathway

Plaza, E. - Aerobic vs. Anaerobic Respiration

Ramundo, E. - Chemiosmosis and ATP Synthase of Photosynthesis 

Randall, C. - Aerobic vs. Anaerobic Respiration

Randall, M. - Krebs Cycle

Reich, J. - C3 Pathway

Reichel, T - Chloroplasts (Thylakoids and ETC)

Ruffo, V. - Chloroplasts

Sondey, J. - Chemoautotrophs vs. Chemoheterotrophs

Sullivan, M. -  Homolactic Fermentation vs. Alcoholic Fermentation

Swenson, W. - The Calvin Cycle

Toal, A. - Chemoautotrophs vs. Photoautotrophs

Vail, F. -  Chemoautotrophs vs. Photoautotrophs

 


Veru, T. - The Krebs Cycle    

Wagner, J. - Chemoautotrophs vs. Chemoheterotrophs

Wetty, A. - Mitochondrion: Cristae and Electron Transport 

 



Monday, January 18, 2021

Casey McKhann New coronavirus variants could cause more reinfections, require updated vaccines

 Casey McKhann 

Mr. Ippolito 

January 19th, 2020

AP Biology/ Current Event 11 


Kai Kupferschmidt. "New coronavirus variants could cause more reinfections, require updated 

vaccines." Science | AAAS, 15 Jan. 2021, https://www.sciencemag.org/news/2021/01/new-coronavirus-variants-could-cause-more-reinfections-require-updated-vaccines. 


Kai Kupferschmidt’s informative and engaging article "New coronavirus variants could cause more reinfections, require updated vaccines” informs the reader about groundbreaking studies and the concerns that have arisen regarding variations of the COVID-19 virus. The article discusses that new strains could bypass antibodies, and reinfect individuals who should be immune. The author cites an incident in Manaus, Brazil as an example of the situation in which a new variant could be leading to rising rates of infectivity. However, the rising number of infections could also just be a result of waning immunity among past carriers. The additional variable of the new variations makes researching the issue much more difficult. Additionally, there are a seemingly endless number of new variations of the virus appearing all across the globe, greatly increasing the difficulty of scientific research as each individual strain of the virus needs to be investigated. The uncertainty and fear arises when scientists ponder about the ability of the current vaccines to prevent additional mutations of the virus from infecting the human body. While currently, it is believed that variations do not bypass the current vaccine, it is not certain that this is true. 

This article is very important to modern society. While it appears that as a society we are nearing the end of this hellish pandemic, these variants present the potential to set our society back to floor 1. This could mean an additional long quarantine period before scientists figure out solutions to these variations. While it does not seem like that is necessary at the moment, it is still a possibility that all individuals would like to avoid. The article should also hopefully raise people's awareness about the virus, especially those who have already suffered from it. It is important that individuals realize that they are not safe just because they have been infected before. 

The article as a whole was extremely informative and lacked many weaknesses. It presented the information very clearly and did a good job presenting solely facts to the reader. It served as an important warning to the reader about potential arising dangers. I think that is important for everyone to read this article because of the information it shares. However, I do believe that the subtopics led to the article becoming slow and boring at times and felt that natural transitions would have been better for the flow of the article. Apart from this one issue, I believe that it was incredibly well written. 


Thursday, January 14, 2021

 Hugh Duffy

Mr. Ippolito 

AP Biology

1/14/2021


Briggs, Helen. “One of Biology's Biggest Mysteries 'Largely Solved' by AI.” BBC News, BBC, 30 Nov. 2020, www.bbc.com/news/science-environment-55133972. 


Recently, an A.I. called AlphaFold accomplished something that was previously thought to be impossible. In labs, mapping proteins can be a long, painful process. This generally takes years to complete, and requires manual labor. With AlphaFold technology, the A.I. can map proteins at speeds far faster than humans. AlphaFold is so smart, that it actually teaches itself how to better map proteins, while mapping proteins. It is comparable to Tesla auto-driving vehicles, which collect data while driving autonomously. This data is sent to the headquarters, where the algorithm is adjusted and automatically updated. With this same technology being applied to scientific research, specifically biology, medicine can develop at rates we’ve never seen before. In the case of AlphaFold, being able to map a protein is just a day and can help scientists rapidly develop vaccines. Additionally, this mapping technology can help scientists develop artificial proteins, which would help those who have protein deficiencies. Mapping proteins can be extremely useful when fighting against new infectious diseases like Covid-19. “One example is Covid-19, where scientists have been studying how the spike protein on the surface of the Sars-CoV-2 virus interacts with receptors in human cells.” (Briggs 2)


I thought this article was well written, however it felt rushed and lacking in information. There really wasn’t anything that explained how AlphaFold was developed, or how it maps proteins to begin with. This article would have benefitted from more extensive research. Briggs mentions how scientists have yet to study how AlphaFold interacts with proteins that have bonded to other macromolecules, so this could be a possibility as to why the article lacks information. The technology is just too new. Overall, this article was very intriguing, and poses the question of what the future holds for A.I. in biology. 


Current Event 11

 Caroline Hulbert                                  1.15.21

AP Bio C Even                                 Current Event 11


Garcia de Jesus, Erin. “Could Delaying a Second Vaccine Dose Lead to More Dangerous Coronavirus Strains?” Science News, 15 Jan. 2021, www.sciencenews.org/article/coronavirus-covid-19-vaccine-delay-second-dose-dangerous-strains


For this current event, I chose to read and review Erin Garcia de Jesus’ article, titled “Could Delaying a Second Vaccine Dose Lead to More Dangerous Coronavirus Strains?”. She begins the article by discussing the debate that has sparked as a result of rising coronavirus cases and slow vaccine rollout. There are multiple temporary solutions to this problem, though the best course of action is being debated. One of these ideas is delaying the rollout of the second dose of the vaccine so that more people can receive a first dose of what is currently available. This would extend the time between doses from 3-4 weeks to around 3 months. However, health officials in the United States strongly advise that states continue with the plan authorized by the FDA: two shots spaced a few weeks apart. After Joe Biden suggested that he would release all shots, the Trump Administration announced that it would no longer be holding back second rounds of the vaccine. This may lead to manufacturing problems and increases the chances that people will not receive their second shots on time. Experts are concerned that if people gain only partial immunity from one vaccine, they may create an ideal environment for more harmful mutations of the virus to arise. Ramón Lorenzo-Redondo, a virologist at Northwestern University Feinberg School of Medicine, states that “we shouldn’t gamble our best tools to fight the pandemic.” Additionally, if immune-dodging variants do arise as a result of shot delays, the vaccine’s effectiveness could be compromised, preventing vaccine-induced antibodies from binding to the virus. 

This article is extremely relevant to society as the coronavirus continues to kill hundreds of thousands of people. Having this information available to the public is especially important to people who distrust the vaccine, and will refuse to receive it. Additionally it provides the different points of view about which path to take in vaccine rollout. 

This article was very well-written and informative about current issues. The author included opinions from numerous health experts about the best course of action in this situation. While very well-written, I thought that the review was a bit long and repetitive. Some of the information was not necessary or repeated multiple times. Making the article more concise would make it more appealing to a wider audience and easier to read.


 Nate Kim

AP Bio, Mr. Ippolito

Current Event 11

1/14/21



Lambert, Jonathan, Susan Milius, Carolyn Gramling, Bruce Bower, Aimee Cunningham, Tina
Hesman Saey, Betsy Mason, Maria Temming, Lisa Grossman, Cassie Martin, Emily
Conover, Bethany Brookshire, et al. “Earth’s Oceans Are Storing Record-Breaking
Amounts of Heat.” Sciencenews.org. N.p., 13 Jan. 2021. Web. 14 Jan. 2021.


In a recent study, researchers found that our oceans absorbed 234 sextillion joules more heat energy in 2020 than the annual average from 1981 to 2010. To put that data point into perspective, Earth’s oceans absorbed about enough heat to boil 1.3 billion kettles of water. Climate scientist Kevin Trenberth informs that tracking ocean temperature is important because warmer water melts more ice off the edges of Greenland and Antarctica, which raises sea levels and supercharges tropical storms. To estimate the total heat energy stored in the upper 2,000 meters of Earth’s oceans, the team of researchers used temperature data from moored sensors, Argo floats, underwater robots and other temperature recording equipment. In an effort to be accurate, a conservative estimate placed the absorbed heat energy at 1 sextillion joules. That’s still 65 million kettles brought to boil, but it’s nowhere near 1.3 billion. Michael Mann, a coauthor of the study, warns that the warmest years on record for the world’s oceans were 2017, 2018 and 2019. If we do not dramatically reduce carbon emissions soon, Mann warns, we won’t have a happy ending. 


The implications of this article are astronomical. The melting of ice is a positive feedback cycle, meaning that the results of one cycle exacerbate the results of the next cycle. Water has an extremely low albedo, meaning that it doesn’t reflect that much sunlight. Ice on the other hand has an albedo anywhere from 10 to 12 times as high. As the oceans absorb more heat, more ice melts meaning that more of Earth’s surface is water instead of ice. When more surface area is water, more heat energy is absorbed by the oceans melting more ice. This cycle continues forever. From the data, we can see that oceans are absorbing more heat energy every year. Combined with the ice-albedo positive feedback cycle, the negative repercussions grow exponentially. In order to remedy this, we must cut down our carbon emissions in order to preserve more ice before it is too late. 


This article was a wakeup call for me. As a sophomore, I took Environmental Science and loved it. I haven’t really kept up to date with recent climate news so this article was a shocker for me. Back in 2018, the trend wasn’t that bad yet. There had only been high temperatures for 2 years in a row. Now, with 4 of the warmest years on record in just 5 years, it is extremely concerning. As an uninformed reader, I wish that the authors of the article described what some of the more technical terms meant. I am not sure what argo floats or under robots do in order to record temperatures. If the author put these terms in layman's terms, the article would be more accessible to a greater demographic. The article has great strengths in its ability to hit home and properly show the direness of the news it presents. The comparison of temperature to kettles brought to boil places an image in the reader's head, giving them a better understanding of how drastic the situation at hand is.


Tuesday, January 12, 2021

Scientists develop a cheaper method that might help create fuels from plants

 Erin Foley - AP Bio C Odd - Current Event 11 - Jan. 10th, 2020


Ohio State University. "Scientists develop a cheaper method that might help create fuels from 

plants." ScienceDaily. ScienceDaily, 8 January 2021. 

<www.sciencedaily.com/releases/2021/01/210108111048.htm>.


In the article, "Scientists develop a cheaper method that might help create fuels from plants”, riveting and comforting discoveries about the future of biofuel are described. For years, scientists have been trying to find more efficient ways to produce biofuels, so that they could one day truly compete with fossil fuels. The process of converting sugar to fuel is well-known and well-used, but it is extremely difficult to do on a mass-scale, even with government-subsidized biofuel initiatives. This process of converting sugar to butanol/ethanol requires a lot of NADH and its derivative, NADPH, both of which allow carbon in cells to be transformed into energy. However, it is usually extremely expensive to produce high levels of these “helper molecules”, or cofactors. Now, a study published in Science Daily reveals that biochemists and engineers at Ohio State may have found a cheaper way to produce them. Researchers used an electrode - a conductor of energy that can oxidize NADH - made out of nickel and copper to recreate NADH and NADPH in their reduced forms. Nickel and copper are both inexpensive materials, thus with a smaller production cost, “biofuels [could become] a very… attractive” energy source, said Vish Subramaniam, senior author on the paper and retired Ohio State professor of engineering. The researchers, Jonathan Kadowaki and Travis Jones, (two mechanical and aerospace engineering graduate students), ran additional tests and found that the oxidized NADH they recreated with the electrode could in fact produce alcohol from another molecule. This proved that butanol/ethanol for fuels can in fact be produced on a cleaner - and cheaper - scale than ever previously thought. 

The environmental impacts of this discovery are obvious, but because NADH and NADPH are involved in so many cellular conversion processes, the experiments have additional implications in the scientific community. For years, global corporations and governments have hesitated to reduce fossil fuel usage/increase reliance on biofuels due to their high production cost. Because of this, our earth is at a major risk of overheating, as fossil fuels release carbon dioxide/greenhouse gases that trap heat in our atmosphere. In 2020, we reached average global temperatures that were 2.25 degrees Fahrenheit above pre-industrial averages. This margin of change is equivalent to that of 2016, which is alarming considering 2016 experienced a natural heating cycle - whereas 2020 experienced a natural cooling cycle. Biofuels, on the other hand, are considered renewable energy sources, emit fewer greenhouse gases, are biodegradable, and are much safer to find on earth than fossil fuels (no drilling or mining necessary). Moreover, the discoveries made by Kadowaki and Jones have implications for oncology. Subramaniam’s previous work shows that controlling the flow of electrons within cancer cells - which they could do more easily with access to NADH - could slow their growth and ability to metastasize. Finally, this discovery could help scientists create synthetic plants, a creation that Subramaniam believes “could potentially reduce the amount of carbon dioxide in the atmosphere and help address climate change.” If NADH is accessible in large quantities, scientists could potentially use it to conduct artificial photosynthesis, bringing them one step closer to synthetic plants.

This article successfully connects intricate biological concepts to relevant global issues, all the while making the biological concepts simple to understand. It has a simple yet effective structure, beginning with the problem (“The process of converting sugar to alcohol has to be very efficient if you want to have the end product be competitive with fossil fuels”) and explaining how the solution was found through scientific research (“A less expensive and simpler method to create the "helper molecules" that allow carbon in cells to be turned into energy”). The authors do not go too in-depth on some ideas, which was at times helpful, as some would have been too abstract for me to understand. For instance, to explain how their discovery relates to cancer, they merely state that “Both cofactors also play an important role in slowing the metabolism of cancer cells and have been a target of treatment for some cancers,” a simple yet impactful description. Finally, the authors did a thorough job at citing the discovery’s research, connecting it to biofuels, oncology, and synthetic plant creation. Still, there was some room for improvement. For one thing, they did not explain the previous method of generating NADH for biofuel creation, or really anything about biofuel creation (other than that it is expensive). This left me somewhat confused as to how their method was cheaper - was the electrode always used to oxidize cofactors, and they just made one with cheaper materials? Or was this a completely new method? Including this information would have clarified how the researchers revolutionized biofuel synthesis. Finally, the researchers could have better explained the importance of using biofuels. They did not list any reasons as to why biofuels from plants are a better alternative to fossil fuels, which required me to complete additional research. Background on biofuels vs. fossil fuels would increase the number of readers this article would reach, and make it more comprehensive in general.


Thursday, January 7, 2021

 “COVID-19 Virus Enters the Brain, Research Strongly Suggests.” ScienceDaily, ScienceDaily, 17 Dec. 2020, www.sciencedaily.com/releases/2020/12/201217154046.htm.

The article “COVID-19 virus enters the brain, research strongly suggests” explains the cognitive effects of the Coronavirus. Researchers at the University of Washington Health Sciences discovered that the protein spike protein in the virus crosses the blood-brain barrier in mice. This protein most likely causes the brain to release inflammatory products and cytokines, a process that is often referred to as a “cytokines storm.” When the immune senses the virus and proteins in the brain, it overreacts in order to kill them. This storm can cause brain fog, fatigue, and other neurological issues. The virus entering certain brain cells can also explain other symptoms of COVID-19: "We know that when you have the COVID infection you have trouble breathing and that's because there's infection in your lung, but an additional explanation is that the virus enters the respiratory centers of the brain and causes problems there as well" (William A. Banks, professor of medicine at the University of Washington School of Medicine).


I am glad that I got to learn more about the effects of the Coronavirus, as it is an important topic given the current state of our world. I had no idea that the brain was affected by the virus, or that the respiratory issues are in part due to the virus’ effects on brain cells. This article provided a great foundation for future research, and I am excited to see what scientists will discover in the future regarding the effects of the Coronavirus on the brain. 


The author of this article summarized everything clearly. I was able to understand everything they wrote about, despite having limited knowledge about the brain. The author should have, however, included more information as to why this research is relevant. What impact do these findings have on the future of medicine or the Coronavirus? Are there possibly other ways in which the virus could impact the brain? Are these effects reversible? Questions like these should have been addressed in the article. Overall, however, I really enjoyed reading this article and look forward to learning more about the neurological effects of the virus. 


New mammal reference genome helps ID genetic variants for human health."

 Angelinna Faisca

Current Event #10

Mr. Ippolito

AP Bio Even


Baylor College of Medicine. "New mammal reference genome helps ID genetic variants for human health." ScienceDaily. ScienceDaily, 23 December 2020. <www.sciencedaily.com/releases/2020/12/201223125728.htm>.


In this article, we learn the great importance of these new genes and what they can do to the diseases that plague our everyday life, especially since we are in a pandemic. Through the breed of money named, rhesus macaque, yes that is its name (Macaca mulatta is its scientific name). Through the rhesus macaque, over 85 million gene variants have been discovered. This amount of genetic variants is the largest scientists have seen amongst nonhuman primates, up to date. Also in this article, is a doctor named, Jeffery Rogers, who remarks, “We have actually identified thousands of new mutations in the population of research animals. Now colleagues all over the country who are investigating various aspects of health and disease using rhesus macaques can begin to make use of that information.” Having said this, this proves that these genes have made an impact on how our world works, including possible remedies to common diseases. The last genome that we have on record was of 2007, some distant years ago. Now we have a whole genome, this allows us to see the DNA of the rhesus macaque much better. While investigating the DNA of the rhesus macaque, their DNA was much more complex and repeating, showing the evolutionary deletions due to competition over the millions of years of evolution. These DNA sequences can possibly cure inverted blindness and even autism. Their DNA is so vast that scientists suggest that each primate has more genetic variants per human, which is pretty crazy to think about. Lastly, these genes will be studied by primatologists, which will give better insight and data about the genomes of non-human primates.


I think that this is very relevant towards our society because with breakthroughs of genetics, we can use their DNA to make discoveries of new cures for diseases that ail us everyday, and still continue to as a society, such as autism, which is a cause that is talked about worldwide and effects almost every single family, no matter the status. Furthermore, if this is the most accurate information since 2007, then what has been missing before this new data? So many questions can be answered, leading to more possibilities that can help humanity in the long run.


It was a short article, so nothing to really critique, however I think that images could have been added since it would enhance the interest that the reader would engage in, creating an image that would help the reader understand better the article, especially if they are not students of biology, unlike the context of us in this class. Overall, the article was easy to understand and I enjoyed reading it.


Wednesday, January 6, 2021

As Rollout Falters, Scientists Debate New Vaccination Tactics

 Kelly Baclija

Mr. Ippolito

AP Bio

January 7, 2020

Wu, Katherine J., and Rebecca Robbins. “As Rollout Falters, Scientists Debate New Vaccination Tactics” The New York Times, The New York Times, 4 Jan. 2021, www.nytimes.com/2021/01/03/health/coronavirus-vaccine-doses.html.

In “As Rollout Falters, Scientists Debate New Vaccination Tactics” by Katherine Wu and Rebecca Robbins, it is explained how scientists are wondering the question--is it the best course of action to delay second doses of the Covid-19 vaccine in the United States? Should most of the population receive half-doses instead? Britain has already decided to delay the second doses in order to distribute the partial protection that is offered by a single shot instead of two. Health officials in America have been opposed to this idea until recently when Moncef Slaoui, scientific adviser of Operation Warp Speed, supported an alternative, that is to give some Americans two half-doses of the Moderna vaccine (a full dose contains 100 micrograms of the active ingredient), as a way to get more immunity from the limited vaccine supply; he stated that in trials, those who received two half-doses produced an “identical immune response to the 100 microgram dose”. This debate has arisen from the fact that the number of Americans who received first doses was incredibly below what the administration hoped for by the end of 2020, and is even more difficult when health measures are carried into politics and many are hesitant to take the vaccine. The vaccines authorized in the US, by companies Pfizer and Moderna, are intended to be delivered in multiple doses on a strict schedule; the first shot allows the immune system to recognize a new pathogen by showing it a harmless version of the virus’s significant features. After the body has time to study these features, the second shot shows them again and helps immune cells commit it to memory and the subsequent dose should increase the potency and durability of immunity. Nonetheless, some protection is provided after the first shot, but experts are unsure how quickly it would fade; some now argue that spreading vaccines thinly across the population would save more lives than half as many individuals receiving both doses on schedule. Steven Danehy, a spokesman for Pfizer, poses an opposition; “Although partial protection from the vaccine appears to begin as early as 12 days after the first dose, two doses of the vaccine are required to provide the maximum protection against the disease, a vaccine efficacy of 95 percent”. 

The topic of this article has a great impact on society because experts are ultimately looking for solutions to the urgent need for more doses for Covid-19, however, no one is settled on the best way to achieve it. Whatever is deemed to be the greatest alternative will also continue to affect our nation depending on how long it will take for things to go back to (relatively) normal and how many more deaths will occur. Furthermore, coming up with a solution for the number of doses will not solve other problems and logistical issues, against the backdrop of a weary health care system and skepticism around vaccines. Ultimately, with a disappointingly slow vaccine rollout in the United States and concerns about a new and fast-spreading variant of the coronavirus, a strategy like delaying second doses is one worth exploring.

“As Rollout Falters, Scientists Debate New Vaccination Tactics” is an incredibly well-written article. It provides many expert opinions which allow the reader to gain a robust understanding of the issue at hand; it also presents both sides of the debate and it is explained in terms of the science behind the vaccine, the behavior of society, and the statistics of the trials recorded. The information is also presented in a way that makes it easy for the audience to follow along. However, there are some improvements that can be made; for instance, although some of the actions that British officials are taking in terms of vaccination tactics are included, it could be beneficial to include some other things of what other countries that have developed a vaccine are doing as well. Ultimately, this was a well-written article, and its topic proves to be highly relevant, especially to our world today.


Monday, January 4, 2021

Current Event #10: Holden D'Avico

Holden D’Avico

Mr. Ippolito

AP Bio

1/7/20


NIH/National Institute of Neurological Disorders and Stroke. "Neuroscientists isolate promising mini antibodies against COVID-19 from a llama: Preliminary results suggest anti-COVID19 nanobodies may be effective at preventing and diagnosing infections." ScienceDaily. ScienceDaily, 22 December 2020. <www.sciencedaily.com/releases/2020/12/201222081257.htm>. 


“Neuroscientists isolate promising mini antibodies against COVID-19 from a llama” provided by the National Institute of Neurological Disorders and Stroke is an article that covers the work of Thomas J. Esparaza and David L. Brody. Esparaza and Brody conduct research at a brain imaging lab at the National Institutes of Health’s National Institute of Neurological Disorders and Stroke. Brody says that “for years TJ and I had been using nanobodies to improve brain imaging. When the pandemic broke, we thought this was a once in a lifetime, all hands-on-deck situation and joined the fight” (Dr. Brody). Nanobodies are a special type of antibody that are naturally produced by carmelids which include camels, alpacas, and llamas. The specific structure of nanobodies make them highly effective in recognizing and combating viruses, bacteria, and antigens. Nanobodies are also important because they are easier and cheaper to produce and they are more stable than typical antibodies. Due to their effectiveness, nanobodies have grown in popularity among medical researchers. When the pandemic broke out, researchers such as Esparaza and Brody were quick to experiment with nanobodies against the SARS-CoV-2 spike protein. The SARS-CoV-2 spike protein acts like a key that opens doors to infections when it binds to a protein receptor on the surface of some cells. The nanobodies produced by researchers work by blocking the spike protein, therefore, preventing it from infecting cells. The researchers experimented with a llama named Cormac and over 28 days, Cormac produced 13 promising nanobodies. Some later research shows that the nanobody was equally effective in preventing infections when it was sprayed. This reveals that the nanobodies can be used in nebulizers. The research team is currently awaiting for approval of their patent for their nanobody. 


The nanobodies produced by Esparaza and Brody are very important because if the patent is approved and the nanobody treatment is approved by the federal government, the lives of many patients infected with COVID could be saved. Every form of research whether it be treatments or vaccines is significant in the fight against the pandemic. Until the vaccine is widely distributed and even afterwards for patients in serious condition, the nanobody treatment could be very useful. Also, for when a new virus or disease spreads across the globe in the future, scientists could model their research off of Esparza and Brody’s work. The nanobody treatment is both important now in order to combat the pandemic and help save lives and in the future when another pandemic inevitably occurs. 


One strength of the article is that it explains the topic very well in order to familiarize the reader with a complex and confusing topic. The article begins with an introduction to the researchers and their field of study. The author then explains nanobodies and their importance over time. Finally, the author explains how nanobodies work (acts like a key) which helped me understand the microscopic interactions between nanobodies, viruses, and cells. One weakness of the article is that it doesn’t detail the specific experiment very well. I have never heard of this type of experiment on llamas and it would be beneficial for the author to go over the experiment. The author should’ve detailed how the experiment was conducted and how the data was collected.


 Current Event #10: “Plunge in carbon emissions from lockdowns will not slow climate change”

Olivia Cevasco

Mr. Ippolito

AP Biology - C Even

7 January, 2021


Borunda, Alejandra. “Plunge in Carbon Emissions from Lockdowns Will Not Slow Climate Change.” Science, 20 May 2020, www.nationalgeographic.com/science/2020/05/plunge-in-carbon-emissions-lockdowns-will-not-slow-climate-change/. 


The article “Plunge in Carbon Emissions from Lockdowns Will Not Slow Climate Change” suggests that although carbon emissions decreased during the Coronavirus pandemic due to worldwide lockdowns and stay-at-home orders, the overall impact on the carbon dioxide concentration in the atmosphere was minute. In 2020, transportation by car dropped 50%, aviation travel dropped 75%, yet carbon dioxide emissions dropped only by 10% (about 2.6 billion tons of CO2), bringing us back to 2006 carbon dioxide levels. Carbon dioxide lingers in the atmosphere from 300 to 1,000 years, so slightly reducing carbon dioxide emission in one year will result only in small changes and our emissions continue to accumulate. Borunda provides an excellent image to explain this concept: 

“Think of the atmosphere as a bathtub. Human-driven CO2 emissions are like the water coming out of the tap. The ocean and land, which absorb or use up some of that CO2, are the drain—but even when they’re wide open, they can only let out half the water that comes in. When a momentous event like this pandemic happens to push CO2 emissions down, it’s as if the bath’s tap has been shut by 17 percent. But over 80 percent of the water is still gushing into the tub, so the water level in the tub will still rise.”

Because of the continual rising, the atmospheric carbon dioxide concentration reached the highest level recorded in human history in May at 418 parts per million. 

While life has changed drastically because of the Coronavirus pandemic and individuals have reduced their carbon dioxide emissions by not driving cars, the drop in carbon dioxide emissions last year will likely become erased when the vaccine enables people to return to work and carbon dioxide emissions increase. So while a lockdown seemed like the temporary solution to reducing the atmospheric CO2 concentration, this method wasn’t sustainable. According to Borunda, “We’re still spitting out more than 80 percent as much CO2 as normal, even when life feels devastatingly different.” In order to actually change our global CO2 emissions, Richard Betts, a British scientist, notes that “it’s not about going back to the way things were, but to a better way.” Decreasing the CO2 concentration in the atmosphere will require innovation that we can sustain over the course of many years, such as the use of bio-plastics, biofuel, wind energy, and solar cells. 


I decided to review this article because I was interested in how our COVID-lifestyles affected the atmospheric CO2 concentration. This article’s main strength is its abundance of statistical data to explain and support Borunda’s idea that 2020’s lifestyle changes had an infinitesimal impact on atmospheric carbon dioxide concentration. Her writing is clear and she provided imagery to explain a confusing concept to distinguish the difference between CO2 emission and the cumulative concentration. To improve Borunda’s already excellent article, I’d suggest more graphs and other images because the textual information was dense. Overall, this article was concise and very informative.